Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Gm44719-201ENSMUST00000206404 149 ntBASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcc2Q6PDG5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Gm10766-202ENSMUST00000194123 606 ntBASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Smarcc2Q6PDG5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcc2Q6PDG5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms