Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.53□□□□□ -0.24
VclQ64727 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VclQ64727 Gm27772-201ENSMUST00000184900 187 ntBASIC13.53□□□□□ -0.24
VclQ64727 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.53□□□□□ -0.24
VclQ64727 Gm28631-201ENSMUST00000190740 334 ntBASIC13.53□□□□□ -0.24
VclQ64727 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.53□□□□□ -0.24
VclQ64727 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VclQ64727 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VclQ64727 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VclQ64727 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VclQ64727 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.53□□□□□ -0.24
VclQ64727 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VclQ64727 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
VclQ64727 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.53□□□□□ -0.24
VclQ64727 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VclQ64727 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VclQ64727 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.52□□□□□ -0.24
VclQ64727 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VclQ64727 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VclQ64727 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VclQ64727 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
VclQ64727 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VclQ64727 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.52□□□□□ -0.24
VclQ64727 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VclQ64727 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VclQ64727 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
VclQ64727 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VclQ64727 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VclQ64727 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VclQ64727 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.52□□□□□ -0.25
VclQ64727 Gm5354-201ENSMUST00000182417 973 ntBASIC13.52□□□□□ -0.25
VclQ64727 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.52□□□□□ -0.25
VclQ64727 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.52□□□□□ -0.25
VclQ64727 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.52□□□□□ -0.25
VclQ64727 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VclQ64727 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
VclQ64727 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VclQ64727 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
VclQ64727 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VclQ64727 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.51□□□□□ -0.25
VclQ64727 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
VclQ64727 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.51□□□□□ -0.25
VclQ64727 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.51□□□□□ -0.25
VclQ64727 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.51□□□□□ -0.25
VclQ64727 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.51□□□□□ -0.25
VclQ64727 Gm5279-201ENSMUST00000199575 745 ntBASIC13.51□□□□□ -0.25
VclQ64727 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms