Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Proscos-202ENSMUST00000178990 666 ntBASIC17.38■□□□□ 0.37
Clcn1Q64347 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.38■□□□□ 0.37
Clcn1Q64347 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.38■□□□□ 0.37
Clcn1Q64347 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn1Q64347 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Gm12384-201ENSMUST00000119228 919 ntBASIC17.37■□□□□ 0.37
Clcn1Q64347 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.37■□□□□ 0.37
Clcn1Q64347 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Gm18054-201ENSMUST00000207539 555 ntBASIC17.37■□□□□ 0.37
Clcn1Q64347 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Clcn1Q64347 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn1Q64347 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Clcn1Q64347 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Clcn1Q64347 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.36■□□□□ 0.37
Clcn1Q64347 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.36■□□□□ 0.37
Clcn1Q64347 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Gm27514-201ENSMUST00000183692 110 ntBASIC17.36■□□□□ 0.37
Clcn1Q64347 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.36■□□□□ 0.37
Clcn1Q64347 Gm7399-201ENSMUST00000032395 858 ntBASIC17.36■□□□□ 0.37
Clcn1Q64347 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC17.36■□□□□ 0.37
Clcn1Q64347 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.36■□□□□ 0.37
Clcn1Q64347 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.36■□□□□ 0.37
Clcn1Q64347 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn1Q64347 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.35■□□□□ 0.37
Clcn1Q64347 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Clcn1Q64347 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Clcn1Q64347 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.35■□□□□ 0.37
Clcn1Q64347 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Gm43818-201ENSMUST00000200605 466 ntBASIC17.35■□□□□ 0.37
Clcn1Q64347 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.35■□□□□ 0.37
Clcn1Q64347 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Clcn1Q64347 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clcn1Q64347 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms