Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Commd3Q63829 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Commd3Q63829 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Gm15173-201ENSMUST00000122049 433 ntBASIC11.42□□□□□ -0.58
Commd3Q63829 Gm45747-201ENSMUST00000212203 999 ntBASIC11.42□□□□□ -0.58
Commd3Q63829 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.42□□□□□ -0.58
Commd3Q63829 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Commd3Q63829 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Commd3Q63829 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Commd3Q63829 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Commd3Q63829 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Commd3Q63829 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Commd3Q63829 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.42□□□□□ -0.58
Commd3Q63829 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Commd3Q63829 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Commd3Q63829 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Commd3Q63829 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.41□□□□□ -0.58
Commd3Q63829 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.41□□□□□ -0.58
Commd3Q63829 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.41□□□□□ -0.58
Commd3Q63829 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.41□□□□□ -0.58
Commd3Q63829 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.41□□□□□ -0.58
Commd3Q63829 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.41□□□□□ -0.58
Commd3Q63829 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.41□□□□□ -0.58
Commd3Q63829 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Commd3Q63829 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.41□□□□□ -0.58
Commd3Q63829 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Commd3Q63829 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.4□□□□□ -0.58
Commd3Q63829 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.4□□□□□ -0.58
Commd3Q63829 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.4□□□□□ -0.58
Commd3Q63829 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Commd3Q63829 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Commd3Q63829 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.4□□□□□ -0.58
Commd3Q63829 Gm16026-204ENSMUST00000162652 683 ntBASIC11.4□□□□□ -0.58
Commd3Q63829 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.4□□□□□ -0.58
Commd3Q63829 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.4□□□□□ -0.58
Commd3Q63829 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.4□□□□□ -0.58
Commd3Q63829 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms