Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
Col11a1Q61245 Gm17208-201ENSMUST00000168388 535 ntBASIC15.06■□□□□ 0
Col11a1Q61245 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Gm5950-201ENSMUST00000213337 772 ntBASIC15.06■□□□□ 0
Col11a1Q61245 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.06■□□□□ 0
Col11a1Q61245 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Gm15547-201ENSMUST00000122152 333 ntBASIC15.06■□□□□ 0
Col11a1Q61245 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Gm7467-201ENSMUST00000185173 652 ntBASIC15.06■□□□□ 0
Col11a1Q61245 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col11a1Q61245 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.06■□□□□ 0
Col11a1Q61245 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.06■□□□□ 0
Col11a1Q61245 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col11a1Q61245 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Col11a1Q61245 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col11a1Q61245 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a1Q61245 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.05■□□□□ -0
Col11a1Q61245 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col11a1Q61245 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Col11a1Q61245 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.05■□□□□ -0
Col11a1Q61245 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a1Q61245 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a1Q61245 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.05■□□□□ -0
Col11a1Q61245 Gm24749-201ENSMUST00000157838 343 ntBASIC15.05■□□□□ -0
Col11a1Q61245 Mir1943-201ENSMUST00000158276 73 ntBASIC15.05■□□□□ -0
Col11a1Q61245 Gm2546-201ENSMUST00000182630 991 ntBASIC15.05■□□□□ -0
Col11a1Q61245 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.05■□□□□ -0
Col11a1Q61245 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.05■□□□□ -0
Col11a1Q61245 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.05■□□□□ -0
Col11a1Q61245 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.05■□□□□ -0
Col11a1Q61245 Gm45770-201ENSMUST00000212105 616 ntBASIC15.05■□□□□ -0
Col11a1Q61245 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col11a1Q61245 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a1Q61245 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Col11a1Q61245 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col11a1Q61245 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.05■□□□□ -0
Col11a1Q61245 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col11a1Q61245 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.04■□□□□ -0
Col11a1Q61245 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col11a1Q61245 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.04■□□□□ -0
Col11a1Q61245 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Col11a1Q61245 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Gm14704-201ENSMUST00000120300 874 ntBASIC15.04■□□□□ -0
Col11a1Q61245 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Col11a1Q61245 Gm18734-201ENSMUST00000172937 808 ntBASIC15.04■□□□□ -0
Col11a1Q61245 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.04■□□□□ -0
Col11a1Q61245 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.04■□□□□ -0
Col11a1Q61245 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a1Q61245 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms