Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxd4Q60688 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxd4Q60688 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.33□□□□□ -0.11
Foxd4Q60688 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxd4Q60688 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Gm6973-201ENSMUST00000117080 721 ntBASIC14.33□□□□□ -0.12
Foxd4Q60688 Gm8312-201ENSMUST00000119380 618 ntBASIC14.33□□□□□ -0.12
Foxd4Q60688 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Foxd4Q60688 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Gm7439-201ENSMUST00000214053 835 ntBASIC14.33□□□□□ -0.12
Foxd4Q60688 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Foxd4Q60688 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Foxd4Q60688 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Foxd4Q60688 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Foxd4Q60688 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Foxd4Q60688 Gm18829-201ENSMUST00000188150 1622 ntBASIC14.33□□□□□ -0.12
Foxd4Q60688 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Foxd4Q60688 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.33□□□□□ -0.12
Foxd4Q60688 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxd4Q60688 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxd4Q60688 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.32□□□□□ -0.12
Foxd4Q60688 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC14.32□□□□□ -0.12
Foxd4Q60688 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC14.32□□□□□ -0.12
Foxd4Q60688 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.32□□□□□ -0.12
Foxd4Q60688 Gm14301-201ENSMUST00000120181 324 ntBASIC14.32□□□□□ -0.12
Foxd4Q60688 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
Foxd4Q60688 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Gm44335-201ENSMUST00000196879 141 ntBASIC14.32□□□□□ -0.12
Foxd4Q60688 Gm44297-201ENSMUST00000198304 141 ntBASIC14.32□□□□□ -0.12
Foxd4Q60688 Gm44346-201ENSMUST00000198851 141 ntBASIC14.32□□□□□ -0.12
Foxd4Q60688 Gm42474-201ENSMUST00000201073 505 ntBASIC14.32□□□□□ -0.12
Foxd4Q60688 Gm44146-201ENSMUST00000203508 816 ntBASIC14.32□□□□□ -0.12
Foxd4Q60688 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Foxd4Q60688 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Foxd4Q60688 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.32□□□□□ -0.12
Foxd4Q60688 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Foxd4Q60688 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Foxd4Q60688 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxd4Q60688 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Foxd4Q60688 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.31□□□□□ -0.12
Foxd4Q60688 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 AA543401-201ENSMUST00000164248 1269 ntBASIC14.31□□□□□ -0.12
Foxd4Q60688 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Foxd4Q60688 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.31□□□□□ -0.12
Foxd4Q60688 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.31□□□□□ -0.12
Foxd4Q60688 Gm9182-201ENSMUST00000217829 639 ntBASIC14.31□□□□□ -0.12
Foxd4Q60688 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Foxd4Q60688 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd4Q60688 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.31□□□□□ -0.12
Foxd4Q60688 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms