Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Xrcc1Q60596 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Xrcc1Q60596 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Xrcc1Q60596 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Gm2445-201ENSMUST00000182798 989 ntBASIC13.16□□□□□ -0.3
Xrcc1Q60596 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Gm7063-201ENSMUST00000186840 981 ntBASIC13.16□□□□□ -0.3
Xrcc1Q60596 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.16□□□□□ -0.3
Xrcc1Q60596 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.16□□□□□ -0.3
Xrcc1Q60596 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xrcc1Q60596 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.15□□□□□ -0.3
Xrcc1Q60596 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Gm28631-201ENSMUST00000190740 334 ntBASIC13.15□□□□□ -0.3
Xrcc1Q60596 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.15□□□□□ -0.3
Xrcc1Q60596 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Xrcc1Q60596 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.15□□□□□ -0.31
Xrcc1Q60596 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Xrcc1Q60596 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Xrcc1Q60596 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.14□□□□□ -0.31
Xrcc1Q60596 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms