Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps54Q5SPW0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps54Q5SPW0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps54Q5SPW0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps54Q5SPW0 Gm15770-201ENSMUST00000117498 584 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms