Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm27628-201ENSMUST00000184911 107 ntBASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm7461-201ENSMUST00000058918 827 ntBASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm15590-201ENSMUST00000078419 552 ntBASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm9385-201ENSMUST00000117563 472 ntBASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms