Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mdc1Q5PSV9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Mdc1Q5PSV9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mdc1Q5PSV9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mdc1Q5PSV9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mdc1Q5PSV9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mdc1Q5PSV9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Gm2991-201ENSMUST00000173338 480 ntBASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Rps4l-202ENSMUST00000204242 789 ntBASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mdc1Q5PSV9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mdc1Q5PSV9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Mdc1Q5PSV9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Gm9368-201ENSMUST00000219348 831 ntBASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Mdc1Q5PSV9 Gm12997-201ENSMUST00000120207 640 ntBASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm25261-201ENSMUST00000157416 134 ntBASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.69■□□□□ 0.42
Mdc1Q5PSV9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.68■□□□□ 0.42
Mdc1Q5PSV9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms