Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Gm12428-201ENSMUST00000119844 727 ntBASIC13.62□□□□□ -0.23
Scn2bQ56A07 Gm6222-201ENSMUST00000120787 396 ntBASIC13.62□□□□□ -0.23
Scn2bQ56A07 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 AA619741-201ENSMUST00000195095 646 ntBASIC13.62□□□□□ -0.23
Scn2bQ56A07 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Gm45453-201ENSMUST00000211758 853 ntBASIC13.62□□□□□ -0.23
Scn2bQ56A07 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn2bQ56A07 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.62□□□□□ -0.23
Scn2bQ56A07 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.62□□□□□ -0.23
Scn2bQ56A07 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.61□□□□□ -0.23
Scn2bQ56A07 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Gm6415-201ENSMUST00000118488 348 ntBASIC13.61□□□□□ -0.23
Scn2bQ56A07 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Gm18766-201ENSMUST00000189811 808 ntBASIC13.61□□□□□ -0.23
Scn2bQ56A07 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.61□□□□□ -0.23
Scn2bQ56A07 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.61□□□□□ -0.23
Scn2bQ56A07 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn2bQ56A07 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms