Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm1Q52KI8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm1Q52KI8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Gm38341-201ENSMUST00000195357 515 ntBASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Srrm1Q52KI8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Mir877-201ENSMUST00000104738 85 ntBASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Gm4271-201ENSMUST00000174444 973 ntBASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm1Q52KI8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Mir686-201ENSMUST00000102174 109 ntBASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Gm29608-201ENSMUST00000190444 463 ntBASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Gm43133-201ENSMUST00000197472 463 ntBASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Gm45865-201ENSMUST00000211815 945 ntBASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.35■□□□□ 0.05
Srrm1Q52KI8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms