Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.23□□□□□ -0.13
Trim80Q3V061 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim80Q3V061 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim80Q3V061 Gm20553-201ENSMUST00000204205 844 ntBASIC14.23□□□□□ -0.13
Trim80Q3V061 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim80Q3V061 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim80Q3V061 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.23□□□□□ -0.13
Trim80Q3V061 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.23□□□□□ -0.13
Trim80Q3V061 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Trim80Q3V061 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Trim80Q3V061 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim80Q3V061 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim80Q3V061 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm22065-201ENSMUST00000103753 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm22066-201ENSMUST00000103761 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm24932-201ENSMUST00000103763 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm24115-201ENSMUST00000103799 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm22190-201ENSMUST00000103827 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm22191-201ENSMUST00000103831 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm24721-201ENSMUST00000103849 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm28018-201ENSMUST00000103869 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm26399-201ENSMUST00000103937 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm22175-201ENSMUST00000175007 78 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm25349-201ENSMUST00000177728 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm23616-201ENSMUST00000177797 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm25871-201ENSMUST00000177816 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm24752-201ENSMUST00000178240 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm24496-201ENSMUST00000178287 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm25649-201ENSMUST00000178476 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm25548-201ENSMUST00000178681 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm23147-201ENSMUST00000178841 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm26095-201ENSMUST00000179270 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm22171-201ENSMUST00000179283 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm23936-201ENSMUST00000179354 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm22619-201ENSMUST00000179516 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm25255-201ENSMUST00000179579 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm24755-201ENSMUST00000179691 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm26506-201ENSMUST00000179692 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm25086-201ENSMUST00000179931 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm23243-201ENSMUST00000180047 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm24659-201ENSMUST00000180212 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm24169-201ENSMUST00000180244 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm23689-201ENSMUST00000180354 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm27359-201ENSMUST00000184153 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm27785-201ENSMUST00000184268 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm27466-201ENSMUST00000184396 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm27703-201ENSMUST00000184836 110 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm10253-201ENSMUST00000194270 940 ntBASIC14.22□□□□□ -0.13
Trim80Q3V061 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trim80Q3V061 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim80Q3V061 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms