Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cnga4Q3UW12 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Mir5126-201ENSMUST00000175513 77 ntBASIC13.93□□□□□ -0.18
Cnga4Q3UW12 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Gm10819-201ENSMUST00000099988 561 ntBASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cnga4Q3UW12 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.92□□□□□ -0.18
Cnga4Q3UW12 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms