Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.63□□□□□ -0.39
Nhlrc4Q3UP44 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm5866-201ENSMUST00000177881 973 ntBASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm19078-201ENSMUST00000206311 727 ntBASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nhlrc4Q3UP44 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nhlrc4Q3UP44 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms