Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3bQ3ULL6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3bQ3ULL6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Upf3bQ3ULL6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3bQ3ULL6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3bQ3ULL6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3bQ3ULL6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3bQ3ULL6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3bQ3ULL6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3bQ3ULL6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3bQ3ULL6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Gm27437-201ENSMUST00000183429 107 ntBASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Gm44855-201ENSMUST00000205725 362 ntBASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.71□□□□□ -0.05
Upf3bQ3ULL6 Matn2-206ENSMUST00000228570 2798 ntBASIC14.71□□□□□ -0.06
Upf3bQ3ULL6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upf3bQ3ULL6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upf3bQ3ULL6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upf3bQ3ULL6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upf3bQ3ULL6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upf3bQ3ULL6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upf3bQ3ULL6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Upf3bQ3ULL6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Gm22189-201ENSMUST00000103822 86 ntBASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Gm28760-201ENSMUST00000185995 736 ntBASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upf3bQ3ULL6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms