Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Gm45880-201ENSMUST00000213041 853 ntBASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upf3aQ3ULJ3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upf3aQ3ULJ3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Upf3aQ3ULJ3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upf3aQ3ULJ3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3aQ3ULJ3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3aQ3ULJ3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3aQ3ULJ3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Upf3aQ3ULJ3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upf3aQ3ULJ3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms