Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Gm12403-201ENSMUST00000121384 959 ntBASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3b2Q3UJB0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Gm30285-201ENSMUST00000214614 422 ntBASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.65■□□□□ 0.42
Sf3b2Q3UJB0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sf3b2Q3UJB0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Gm5781-201ENSMUST00000219792 443 ntBASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.64■□□□□ 0.41
Sf3b2Q3UJB0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Gm37042-201ENSMUST00000193816 581 ntBASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 AC154680.1-201ENSMUST00000224376 859 ntBASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.63■□□□□ 0.41
Sf3b2Q3UJB0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms