Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Gm12217-201ENSMUST00000118858 696 ntBASIC16.09■□□□□ 0.17
Col5a2Q3U962 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Gm13570-201ENSMUST00000140763 309 ntBASIC16.09■□□□□ 0.17
Col5a2Q3U962 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.09■□□□□ 0.17
Col5a2Q3U962 Gm19163-201ENSMUST00000223313 780 ntBASIC16.09■□□□□ 0.17
Col5a2Q3U962 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col5a2Q3U962 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col5a2Q3U962 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Col5a2Q3U962 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col5a2Q3U962 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col5a2Q3U962 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col5a2Q3U962 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col5a2Q3U962 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col5a2Q3U962 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Gm25214-201ENSMUST00000104573 129 ntBASIC16.08■□□□□ 0.16
Col5a2Q3U962 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Col5a2Q3U962 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Gm5523-201ENSMUST00000180415 997 ntBASIC16.08■□□□□ 0.16
Col5a2Q3U962 Gm8885-201ENSMUST00000189382 598 ntBASIC16.08■□□□□ 0.16
Col5a2Q3U962 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.08■□□□□ 0.16
Col5a2Q3U962 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Col5a2Q3U962 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col5a2Q3U962 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.07■□□□□ 0.16
Col5a2Q3U962 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Gm6447-201ENSMUST00000118905 835 ntBASIC16.07■□□□□ 0.16
Col5a2Q3U962 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col5a2Q3U962 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.07■□□□□ 0.16
Col5a2Q3U962 Gm37042-201ENSMUST00000193816 581 ntBASIC16.07■□□□□ 0.16
Col5a2Q3U962 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.07■□□□□ 0.16
Col5a2Q3U962 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.07■□□□□ 0.16
Col5a2Q3U962 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col5a2Q3U962 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Gm28693-202ENSMUST00000190758 331 ntBASIC16.06■□□□□ 0.16
Col5a2Q3U962 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.06■□□□□ 0.16
Col5a2Q3U962 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.06■□□□□ 0.16
Col5a2Q3U962 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.06■□□□□ 0.16
Col5a2Q3U962 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.06■□□□□ 0.16
Col5a2Q3U962 Sybu-209ENSMUST00000228639 4113 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms