Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.44□□□□□ -0.1
Cul4aQ3TCH7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Gm15653-201ENSMUST00000119247 907 ntBASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Gm21470-201ENSMUST00000187680 696 ntBASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.43□□□□□ -0.1
Cul4aQ3TCH7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Gm24158-201ENSMUST00000175263 71 ntBASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Shd-206ENSMUST00000225145 998 ntBASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cul4aQ3TCH7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms