Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab42Q0PD08 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.18□□□□□ -0.46
Rab42Q0PD08 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.18□□□□□ -0.46
Rab42Q0PD08 Gm18206-201ENSMUST00000207027 926 ntBASIC12.18□□□□□ -0.46
Rab42Q0PD08 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rab42Q0PD08 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.17□□□□□ -0.46
Rab42Q0PD08 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.17□□□□□ -0.46
Rab42Q0PD08 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.17□□□□□ -0.46
Rab42Q0PD08 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab42Q0PD08 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.17□□□□□ -0.46
Rab42Q0PD08 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.17□□□□□ -0.46
Rab42Q0PD08 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rab42Q0PD08 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.17□□□□□ -0.46
Rab42Q0PD08 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab42Q0PD08 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab42Q0PD08 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms