Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Rprl2-201ENSMUST00000157150 290 ntBASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Gm27494-201ENSMUST00000184735 189 ntBASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Gm2213-201ENSMUST00000197485 688 ntBASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.29□□□□□ -0.28
Ptchd3Q0EEE2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ptchd3Q0EEE2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ptchd3Q0EEE2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ptchd3Q0EEE2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ptchd3Q0EEE2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ptchd3Q0EEE2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ptchd3Q0EEE2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ptchd3Q0EEE2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ptchd3Q0EEE2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ptchd3Q0EEE2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ptchd3Q0EEE2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Gm13365-201ENSMUST00000121188 973 ntBASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Gm24513-201ENSMUST00000174964 138 ntBASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Gm27397-201ENSMUST00000184997 107 ntBASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms