Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Gm25214-201ENSMUST00000104573 129 ntBASIC12.17□□□□□ -0.46
Chd8Q09XV5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Gm37666-201ENSMUST00000194110 866 ntBASIC12.17□□□□□ -0.46
Chd8Q09XV5 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Gm45224-201ENSMUST00000208203 414 ntBASIC12.17□□□□□ -0.46
Chd8Q09XV5 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.17□□□□□ -0.46
Chd8Q09XV5 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd8Q09XV5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gm11637-201ENSMUST00000120601 592 ntBASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gm12882-201ENSMUST00000121696 517 ntBASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gm15881-201ENSMUST00000148792 942 ntBASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.16□□□□□ -0.46
Chd8Q09XV5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.16□□□□□ -0.46
Chd8Q09XV5 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.16□□□□□ -0.46
Chd8Q09XV5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.16□□□□□ -0.46
Chd8Q09XV5 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gm9726-201ENSMUST00000180321 678 ntBASIC12.16□□□□□ -0.46
Chd8Q09XV5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd8Q09XV5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.15□□□□□ -0.46
Chd8Q09XV5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Gm11531-201ENSMUST00000117614 555 ntBASIC12.15□□□□□ -0.46
Chd8Q09XV5 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.15□□□□□ -0.46
Chd8Q09XV5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Gm22138-201ENSMUST00000158748 128 ntBASIC12.15□□□□□ -0.46
Chd8Q09XV5 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Gm9139-201ENSMUST00000218817 700 ntBASIC12.15□□□□□ -0.46
Chd8Q09XV5 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.15□□□□□ -0.46
Chd8Q09XV5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.15□□□□□ -0.46
Chd8Q09XV5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.15□□□□□ -0.46
Chd8Q09XV5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.15□□□□□ -0.46
Chd8Q09XV5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chd8Q09XV5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chd8Q09XV5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chd8Q09XV5 Gm14274-201ENSMUST00000117182 615 ntBASIC12.15□□□□□ -0.47
Chd8Q09XV5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.15□□□□□ -0.47
Chd8Q09XV5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Chd8Q09XV5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Chd8Q09XV5 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.15□□□□□ -0.47
Chd8Q09XV5 Gm45120-201ENSMUST00000208880 408 ntBASIC12.15□□□□□ -0.47
Chd8Q09XV5 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms