Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col10a1Q05306 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col10a1Q05306 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col10a1Q05306 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col10a1Q05306 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col10a1Q05306 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col10a1Q05306 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col10a1Q05306 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col10a1Q05306 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col10a1Q05306 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col10a1Q05306 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.7□□□□□ -0.38
Col10a1Q05306 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col10a1Q05306 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Col10a1Q05306 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.69□□□□□ -0.38
Col10a1Q05306 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col10a1Q05306 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Gm6912-201ENSMUST00000117218 544 ntBASIC12.69□□□□□ -0.38
Col10a1Q05306 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.69□□□□□ -0.38
Col10a1Q05306 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col10a1Q05306 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.69□□□□□ -0.38
Col10a1Q05306 Gm7730-201ENSMUST00000212486 454 ntBASIC12.69□□□□□ -0.38
Col10a1Q05306 Gm17795-201ENSMUST00000214505 757 ntBASIC12.69□□□□□ -0.38
Col10a1Q05306 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.69□□□□□ -0.38
Col10a1Q05306 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.69□□□□□ -0.38
Col10a1Q05306 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.69□□□□□ -0.38
Col10a1Q05306 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.69□□□□□ -0.38
Col10a1Q05306 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Col10a1Q05306 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.69□□□□□ -0.38
Col10a1Q05306 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col10a1Q05306 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Gm27437-201ENSMUST00000183429 107 ntBASIC12.68□□□□□ -0.38
Col10a1Q05306 Gm6218-201ENSMUST00000219812 628 ntBASIC12.68□□□□□ -0.38
Col10a1Q05306 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.68□□□□□ -0.38
Col10a1Q05306 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.68□□□□□ -0.38
Col10a1Q05306 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col10a1Q05306 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col10a1Q05306 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col10a1Q05306 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col10a1Q05306 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col10a1Q05306 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Col10a1Q05306 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col10a1Q05306 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms