Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Msx2Q03358 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Msx2Q03358 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Msx2Q03358 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.34□□□□□ -0.27
Msx2Q03358 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.34□□□□□ -0.27
Msx2Q03358 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Msx2Q03358 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Msx2Q03358 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Msx2Q03358 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Msx2Q03358 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Msx2Q03358 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Msx2Q03358 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Msx2Q03358 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
Msx2Q03358 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Msx2Q03358 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Msx2Q03358 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Msx2Q03358 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.33□□□□□ -0.28
Msx2Q03358 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Msx2Q03358 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Msx2Q03358 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.33□□□□□ -0.28
Msx2Q03358 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.33□□□□□ -0.28
Msx2Q03358 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Msx2Q03358 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.33□□□□□ -0.28
Msx2Q03358 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.33□□□□□ -0.28
Msx2Q03358 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.33□□□□□ -0.28
Msx2Q03358 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.33□□□□□ -0.28
Msx2Q03358 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.33□□□□□ -0.28
Msx2Q03358 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Msx2Q03358 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msx2Q03358 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Msx2Q03358 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Msx2Q03358 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.32□□□□□ -0.28
Msx2Q03358 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.32□□□□□ -0.28
Msx2Q03358 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Msx2Q03358 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.32□□□□□ -0.28
Msx2Q03358 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Msx2Q03358 Rpph1-201ENSMUST00000175096 319 ntBASIC13.32□□□□□ -0.28
Msx2Q03358 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Gm2445-201ENSMUST00000182798 989 ntBASIC13.32□□□□□ -0.28
Msx2Q03358 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Msx2Q03358 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Msx2Q03358 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.32□□□□□ -0.28
Msx2Q03358 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Msx2Q03358 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.32□□□□□ -0.28
Msx2Q03358 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msx2Q03358 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.32□□□□□ -0.28
Msx2Q03358 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Msx2Q03358 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.32□□□□□ -0.28
Msx2Q03358 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.31□□□□□ -0.28
Msx2Q03358 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Msx2Q03358 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.31□□□□□ -0.28
Msx2Q03358 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.31□□□□□ -0.28
Msx2Q03358 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.31□□□□□ -0.28
Msx2Q03358 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.31□□□□□ -0.28
Msx2Q03358 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Gm25925-201ENSMUST00000158314 306 ntBASIC13.31□□□□□ -0.28
Msx2Q03358 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.31□□□□□ -0.28
Msx2Q03358 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Msx2Q03358 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Msx2Q03358 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msx2Q03358 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms