Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.13■□□□□ 0.33
Smarcc1P97496 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.13■□□□□ 0.33
Smarcc1P97496 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcc1P97496 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm11618-201ENSMUST00000117946 267 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm12403-201ENSMUST00000121384 959 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcc1P97496 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm10608-202ENSMUST00000213924 676 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.12■□□□□ 0.33
Smarcc1P97496 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcc1P97496 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc1P97496 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.11■□□□□ 0.33
Smarcc1P97496 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Gm37259-201ENSMUST00000193903 849 ntBASIC17.11■□□□□ 0.33
Smarcc1P97496 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.11■□□□□ 0.33
Smarcc1P97496 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smarcc1P97496 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc1P97496 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smarcc1P97496 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.1■□□□□ 0.33
Smarcc1P97496 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.1■□□□□ 0.33
Smarcc1P97496 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.1■□□□□ 0.33
Smarcc1P97496 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.1■□□□□ 0.33
Smarcc1P97496 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.1■□□□□ 0.33
Smarcc1P97496 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.1■□□□□ 0.33
Smarcc1P97496 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.1■□□□□ 0.33
Smarcc1P97496 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smarcc1P97496 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms