Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Gm43758-201ENSMUST00000199500 367 ntBASIC17.16■□□□□ 0.34
Nkx2-3P97334 Gm44069-201ENSMUST00000204898 506 ntBASIC17.16■□□□□ 0.34
Nkx2-3P97334 Gm6334-201ENSMUST00000207083 228 ntBASIC17.16■□□□□ 0.34
Nkx2-3P97334 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.16■□□□□ 0.34
Nkx2-3P97334 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Gm11591-201ENSMUST00000120063 702 ntBASIC17.15■□□□□ 0.34
Nkx2-3P97334 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Nkx2-3P97334 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Nkx2-3P97334 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Gm13350-201ENSMUST00000120519 479 ntBASIC17.14■□□□□ 0.33
Nkx2-3P97334 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Olfr284-202ENSMUST00000206647 966 ntBASIC17.14■□□□□ 0.33
Nkx2-3P97334 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nkx2-3P97334 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.14■□□□□ 0.33
Nkx2-3P97334 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.14■□□□□ 0.33
Nkx2-3P97334 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.14■□□□□ 0.33
Nkx2-3P97334 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-3P97334 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms