Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.24□□□□□ -0.45
H3f3aP84244 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
H3f3aP84244 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.24□□□□□ -0.45
H3f3aP84244 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
H3f3aP84244 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
H3f3aP84244 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
H3f3aP84244 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.24□□□□□ -0.45
H3f3aP84244 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.24□□□□□ -0.45
H3f3aP84244 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Gm28760-201ENSMUST00000185995 736 ntBASIC12.24□□□□□ -0.45
H3f3aP84244 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Gm42612-201ENSMUST00000197986 623 ntBASIC12.24□□□□□ -0.45
H3f3aP84244 Gm43170-201ENSMUST00000199827 612 ntBASIC12.24□□□□□ -0.45
H3f3aP84244 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.24□□□□□ -0.45
H3f3aP84244 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
H3f3aP84244 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.24□□□□□ -0.45
H3f3aP84244 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.24□□□□□ -0.45
H3f3aP84244 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
H3f3aP84244 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
H3f3aP84244 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
H3f3aP84244 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
H3f3aP84244 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3aP84244 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
H3f3aP84244 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
H3f3aP84244 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
H3f3aP84244 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.23□□□□□ -0.45
H3f3aP84244 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.23□□□□□ -0.45
H3f3aP84244 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
H3f3aP84244 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.23□□□□□ -0.45
H3f3aP84244 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Gm27772-201ENSMUST00000184900 187 ntBASIC12.23□□□□□ -0.45
H3f3aP84244 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.23□□□□□ -0.45
H3f3aP84244 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Gm5279-201ENSMUST00000199575 745 ntBASIC12.23□□□□□ -0.45
H3f3aP84244 Gm44855-201ENSMUST00000205725 362 ntBASIC12.23□□□□□ -0.45
H3f3aP84244 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
H3f3aP84244 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.23□□□□□ -0.45
H3f3aP84244 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.23□□□□□ -0.45
H3f3aP84244 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
H3f3aP84244 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
H3f3aP84244 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3aP84244 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.22□□□□□ -0.45
H3f3aP84244 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
H3f3aP84244 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms