Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CiitaP79621 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CiitaP79621 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.87□□□□□ -0.03
CiitaP79621 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.87□□□□□ -0.03
CiitaP79621 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CiitaP79621 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
CiitaP79621 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CiitaP79621 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.87□□□□□ -0.03
CiitaP79621 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CiitaP79621 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CiitaP79621 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CiitaP79621 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.86□□□□□ -0.03
CiitaP79621 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CiitaP79621 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.86□□□□□ -0.03
CiitaP79621 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CiitaP79621 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm15770-201ENSMUST00000117498 584 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm12403-201ENSMUST00000121384 959 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.86□□□□□ -0.03
CiitaP79621 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CiitaP79621 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CiitaP79621 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CiitaP79621 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.86□□□□□ -0.03
CiitaP79621 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm43433-201ENSMUST00000196573 481 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.86□□□□□ -0.03
CiitaP79621 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.86□□□□□ -0.03
CiitaP79621 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Gm5356-201ENSMUST00000093326 615 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.86□□□□□ -0.03
CiitaP79621 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CiitaP79621 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CiitaP79621 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CiitaP79621 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CiitaP79621 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CiitaP79621 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.85□□□□□ -0.03
CiitaP79621 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CiitaP79621 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.85□□□□□ -0.03
CiitaP79621 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.85□□□□□ -0.03
CiitaP79621 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Gm17794-201ENSMUST00000220252 955 ntBASIC14.85□□□□□ -0.03
CiitaP79621 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CiitaP79621 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.85□□□□□ -0.03
CiitaP79621 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CiitaP79621 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CiitaP79621 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
CiitaP79621 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CiitaP79621 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CiitaP79621 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.84□□□□□ -0.03
CiitaP79621 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms