Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Msx3P70354 Gm6912-201ENSMUST00000117218 544 ntBASIC14.14□□□□□ -0.15
Msx3P70354 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Gm13616-201ENSMUST00000120600 222 ntBASIC14.14□□□□□ -0.15
Msx3P70354 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.14□□□□□ -0.15
Msx3P70354 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.14□□□□□ -0.15
Msx3P70354 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.14□□□□□ -0.15
Msx3P70354 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.14□□□□□ -0.15
Msx3P70354 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.14□□□□□ -0.15
Msx3P70354 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.14□□□□□ -0.15
Msx3P70354 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Msx3P70354 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.14□□□□□ -0.15
Msx3P70354 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Msx3P70354 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.14□□□□□ -0.15
Msx3P70354 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Msx3P70354 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msx3P70354 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Msx3P70354 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.13□□□□□ -0.15
Msx3P70354 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.13□□□□□ -0.15
Msx3P70354 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Msx3P70354 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Msx3P70354 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Msx3P70354 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.13□□□□□ -0.15
Msx3P70354 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.13□□□□□ -0.15
Msx3P70354 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Msx3P70354 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msx3P70354 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
Msx3P70354 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Msx3P70354 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.12□□□□□ -0.15
Msx3P70354 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.12□□□□□ -0.15
Msx3P70354 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Msx3P70354 Gm17837-201ENSMUST00000186435 985 ntBASIC14.12□□□□□ -0.15
Msx3P70354 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.12□□□□□ -0.15
Msx3P70354 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Msx3P70354 Matn2-206ENSMUST00000228570 2798 ntBASIC14.12□□□□□ -0.15
Msx3P70354 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Msx3P70354 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msx3P70354 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.12□□□□□ -0.15
Msx3P70354 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.12□□□□□ -0.15
Msx3P70354 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms