Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.47□□□□□ -0.57
Pdlim4P70271 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Gm12585-201ENSMUST00000117307 290 ntBASIC11.47□□□□□ -0.57
Pdlim4P70271 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.47□□□□□ -0.57
Pdlim4P70271 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pdlim4P70271 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdlim4P70271 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.47□□□□□ -0.57
Pdlim4P70271 Gm43703-201ENSMUST00000200523 763 ntBASIC11.47□□□□□ -0.57
Pdlim4P70271 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.47□□□□□ -0.57
Pdlim4P70271 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.47□□□□□ -0.57
Pdlim4P70271 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Pdlim4P70271 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdlim4P70271 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.47□□□□□ -0.57
Pdlim4P70271 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Gm4875-201ENSMUST00000118257 786 ntBASIC11.46□□□□□ -0.57
Pdlim4P70271 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Gm21470-201ENSMUST00000187680 696 ntBASIC11.46□□□□□ -0.57
Pdlim4P70271 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.46□□□□□ -0.57
Pdlim4P70271 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.46□□□□□ -0.57
Pdlim4P70271 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.46□□□□□ -0.57
Pdlim4P70271 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Pdlim4P70271 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdlim4P70271 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pdlim4P70271 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim4P70271 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim4P70271 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim4P70271 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.46□□□□□ -0.58
Pdlim4P70271 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim4P70271 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim4P70271 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pdlim4P70271 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim4P70271 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim4P70271 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.46□□□□□ -0.58
Pdlim4P70271 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdlim4P70271 Matn2-206ENSMUST00000228570 2798 ntBASIC11.45□□□□□ -0.58
Pdlim4P70271 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim4P70271 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim4P70271 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim4P70271 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim4P70271 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim4P70271 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim4P70271 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim4P70271 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms