Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pfn1P62962 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Pfn1P62962 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.67□□□□□ -0.7
Pfn1P62962 Gm27459-201ENSMUST00000184860 107 ntBASIC10.67□□□□□ -0.7
Pfn1P62962 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.67□□□□□ -0.7
Pfn1P62962 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.67□□□□□ -0.7
Pfn1P62962 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.67□□□□□ -0.7
Pfn1P62962 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.67□□□□□ -0.7
Pfn1P62962 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pfn1P62962 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pfn1P62962 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Pfn1P62962 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pfn1P62962 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.66□□□□□ -0.7
Pfn1P62962 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Pfn1P62962 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Pfn1P62962 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pfn1P62962 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pfn1P62962 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.66□□□□□ -0.7
Pfn1P62962 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.66□□□□□ -0.7
Pfn1P62962 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.66□□□□□ -0.7
Pfn1P62962 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.66□□□□□ -0.7
Pfn1P62962 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.66□□□□□ -0.7
Pfn1P62962 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Gm2272-201ENSMUST00000194903 582 ntBASIC10.66□□□□□ -0.7
Pfn1P62962 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.66□□□□□ -0.7
Pfn1P62962 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.66□□□□□ -0.7
Pfn1P62962 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.66□□□□□ -0.7
Pfn1P62962 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.66□□□□□ -0.7
Pfn1P62962 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.66□□□□□ -0.7
Pfn1P62962 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.66□□□□□ -0.7
Pfn1P62962 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pfn1P62962 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pfn1P62962 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Pfn1P62962 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.65□□□□□ -0.7
Pfn1P62962 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.65□□□□□ -0.7
Pfn1P62962 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pfn1P62962 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.65□□□□□ -0.7
Pfn1P62962 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Pfn1P62962 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.65□□□□□ -0.7
Pfn1P62962 Gm28033-201ENSMUST00000184224 96 ntBASIC10.65□□□□□ -0.7
Pfn1P62962 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pfn1P62962 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms