Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nphp4P59240 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC18.42■□□□□ 0.54
Nphp4P59240 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Nphp4P59240 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Nphp4P59240 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC18.42■□□□□ 0.54
Nphp4P59240 Gm6013-201ENSMUST00000212264 699 ntBASIC18.42■□□□□ 0.54
Nphp4P59240 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC18.42■□□□□ 0.54
Nphp4P59240 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 n-R5s195-201ENSMUST00000082891 119 ntBASIC18.42■□□□□ 0.54
Nphp4P59240 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.42■□□□□ 0.54
Nphp4P59240 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nphp4P59240 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nphp4P59240 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nphp4P59240 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Nphp4P59240 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Nphp4P59240 Gm43179-201ENSMUST00000198797 275 ntBASIC18.41■□□□□ 0.54
Nphp4P59240 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC18.41■□□□□ 0.54
Nphp4P59240 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nphp4P59240 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Gm43423-201ENSMUST00000198390 2094 ntBASIC18.41■□□□□ 0.54
Nphp4P59240 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nphp4P59240 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nphp4P59240 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm25261-201ENSMUST00000157416 134 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC18.4■□□□□ 0.54
Nphp4P59240 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Nphp4P59240 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm18222-201ENSMUST00000202416 1387 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.4■□□□□ 0.54
Nphp4P59240 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Nphp4P59240 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm21451-201ENSMUST00000111062 2775 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nphp4P59240 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC18.4■□□□□ 0.54
Nphp4P59240 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Gm12363-201ENSMUST00000122250 668 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm6222-202ENSMUST00000182143 629 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm5850-201ENSMUST00000192923 1206 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC18.4■□□□□ 0.54
Nphp4P59240 AC159896.2-201ENSMUST00000214753 269 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 AC154319.1-201ENSMUST00000216330 312 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 AL589735.1-201ENSMUST00000224353 270 ntBASIC18.4■□□□□ 0.54
Nphp4P59240 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nphp4P59240 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nphp4P59240 Gm43273-201ENSMUST00000199649 2594 ntBASIC18.39■□□□□ 0.54
Nphp4P59240 Gm38049-201ENSMUST00000195698 1372 ntBASIC18.39■□□□□ 0.54
Nphp4P59240 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nphp4P59240 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms