Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lim2P56563 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Lim2P56563 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.76□□□□□ -0.21
Lim2P56563 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.76□□□□□ -0.21
Lim2P56563 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Lim2P56563 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Lim2P56563 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.75□□□□□ -0.21
Lim2P56563 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.75□□□□□ -0.21
Lim2P56563 Gm6912-201ENSMUST00000117218 544 ntBASIC13.75□□□□□ -0.21
Lim2P56563 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Lim2P56563 Gm13385-201ENSMUST00000121089 220 ntBASIC13.75□□□□□ -0.21
Lim2P56563 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Lim2P56563 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.75□□□□□ -0.21
Lim2P56563 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.75□□□□□ -0.21
Lim2P56563 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.75□□□□□ -0.21
Lim2P56563 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.75□□□□□ -0.21
Lim2P56563 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.75□□□□□ -0.21
Lim2P56563 Gm17795-201ENSMUST00000214505 757 ntBASIC13.75□□□□□ -0.21
Lim2P56563 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.75□□□□□ -0.21
Lim2P56563 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Lim2P56563 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.75□□□□□ -0.21
Lim2P56563 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lim2P56563 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lim2P56563 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Lim2P56563 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.74□□□□□ -0.21
Lim2P56563 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Lim2P56563 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Lim2P56563 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.74□□□□□ -0.21
Lim2P56563 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.74□□□□□ -0.21
Lim2P56563 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.74□□□□□ -0.21
Lim2P56563 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Lim2P56563 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lim2P56563 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lim2P56563 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lim2P56563 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.73□□□□□ -0.21
Lim2P56563 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Gm12859-201ENSMUST00000117834 427 ntBASIC13.73□□□□□ -0.21
Lim2P56563 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lim2P56563 Gm15240-201ENSMUST00000118156 720 ntBASIC13.73□□□□□ -0.21
Lim2P56563 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Lim2P56563 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Lim2P56563 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.73□□□□□ -0.21
Lim2P56563 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms