Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NcanP55066 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NcanP55066 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.36□□□□□ -0.11
NcanP55066 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Gm38317-201ENSMUST00000195564 343 ntBASIC14.36□□□□□ -0.11
NcanP55066 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Gm45770-201ENSMUST00000212105 616 ntBASIC14.36□□□□□ -0.11
NcanP55066 Gm10752-201ENSMUST00000218348 729 ntBASIC14.36□□□□□ -0.11
NcanP55066 Gm5781-201ENSMUST00000219792 443 ntBASIC14.36□□□□□ -0.11
NcanP55066 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
NcanP55066 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NcanP55066 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NcanP55066 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
NcanP55066 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.35□□□□□ -0.11
NcanP55066 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.35□□□□□ -0.11
NcanP55066 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.35□□□□□ -0.11
NcanP55066 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NcanP55066 Gm11675-201ENSMUST00000121873 832 ntBASIC14.35□□□□□ -0.11
NcanP55066 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.35□□□□□ -0.11
NcanP55066 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.35□□□□□ -0.11
NcanP55066 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.35□□□□□ -0.11
NcanP55066 Gm37042-201ENSMUST00000193816 581 ntBASIC14.35□□□□□ -0.11
NcanP55066 Gm7600-201ENSMUST00000209657 785 ntBASIC14.35□□□□□ -0.11
NcanP55066 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.35□□□□□ -0.11
NcanP55066 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.35□□□□□ -0.11
NcanP55066 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.35□□□□□ -0.11
NcanP55066 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NcanP55066 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.35□□□□□ -0.11
NcanP55066 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.35□□□□□ -0.11
NcanP55066 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.35□□□□□ -0.11
NcanP55066 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.35□□□□□ -0.11
NcanP55066 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NcanP55066 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NcanP55066 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.34□□□□□ -0.11
NcanP55066 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NcanP55066 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.34□□□□□ -0.11
NcanP55066 Gm23270-201ENSMUST00000104055 131 ntBASIC14.34□□□□□ -0.11
NcanP55066 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NcanP55066 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NcanP55066 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.34□□□□□ -0.11
NcanP55066 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.34□□□□□ -0.11
NcanP55066 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NcanP55066 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.34□□□□□ -0.11
NcanP55066 Gm8738-201ENSMUST00000172606 329 ntBASIC14.34□□□□□ -0.11
NcanP55066 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.34□□□□□ -0.11
NcanP55066 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms