Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atxn1P54254 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.64□□□□□ -0.23
Atxn1P54254 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Atxn1P54254 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Atxn1P54254 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Atxn1P54254 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Atxn1P54254 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Atxn1P54254 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Atxn1P54254 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.64□□□□□ -0.23
Atxn1P54254 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Atxn1P54254 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.64□□□□□ -0.23
Atxn1P54254 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.64□□□□□ -0.23
Atxn1P54254 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.64□□□□□ -0.23
Atxn1P54254 Gm24644-201ENSMUST00000157114 139 ntBASIC13.64□□□□□ -0.23
Atxn1P54254 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.64□□□□□ -0.23
Atxn1P54254 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.64□□□□□ -0.23
Atxn1P54254 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.64□□□□□ -0.23
Atxn1P54254 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.64□□□□□ -0.23
Atxn1P54254 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Gm10012-201ENSMUST00000078252 192 ntBASIC13.64□□□□□ -0.23
Atxn1P54254 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Atxn1P54254 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Atxn1P54254 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Atxn1P54254 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.64□□□□□ -0.23
Atxn1P54254 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.64□□□□□ -0.23
Atxn1P54254 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Atxn1P54254 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Atxn1P54254 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atxn1P54254 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.63□□□□□ -0.23
Atxn1P54254 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.63□□□□□ -0.23
Atxn1P54254 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.63□□□□□ -0.23
Atxn1P54254 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.63□□□□□ -0.23
Atxn1P54254 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Gm12176-201ENSMUST00000121420 875 ntBASIC13.63□□□□□ -0.23
Atxn1P54254 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Gm19184-201ENSMUST00000196798 928 ntBASIC13.63□□□□□ -0.23
Atxn1P54254 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Atxn1P54254 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Atxn1P54254 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atxn1P54254 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Atxn1P54254 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.62□□□□□ -0.23
Atxn1P54254 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Atxn1P54254 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Atxn1P54254 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.62□□□□□ -0.23
Atxn1P54254 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.62□□□□□ -0.23
Atxn1P54254 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Atxn1P54254 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Gm24196-201ENSMUST00000179161 110 ntBASIC13.62□□□□□ -0.23
Atxn1P54254 Gm4804-201ENSMUST00000182234 999 ntBASIC13.62□□□□□ -0.23
Atxn1P54254 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.62□□□□□ -0.23
Atxn1P54254 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.62□□□□□ -0.23
Atxn1P54254 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.62□□□□□ -0.23
Atxn1P54254 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms