Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox1P53783 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox1P53783 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox1P53783 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox1P53783 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox1P53783 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Gm24447-201ENSMUST00000083977 338 ntBASIC13.98□□□□□ -0.17
Sox1P53783 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Sox1P53783 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.98□□□□□ -0.17
Sox1P53783 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Sox1P53783 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox1P53783 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Sox1P53783 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox1P53783 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox1P53783 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Sox1P53783 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.97□□□□□ -0.17
Sox1P53783 Gm11618-201ENSMUST00000117946 267 ntBASIC13.97□□□□□ -0.17
Sox1P53783 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.97□□□□□ -0.17
Sox1P53783 Gm8194-201ENSMUST00000159783 859 ntBASIC13.97□□□□□ -0.17
Sox1P53783 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox1P53783 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.97□□□□□ -0.17
Sox1P53783 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox1P53783 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Sox1P53783 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox1P53783 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sox1P53783 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sox1P53783 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Gm13611-201ENSMUST00000118269 318 ntBASIC13.96□□□□□ -0.17
Sox1P53783 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.96□□□□□ -0.17
Sox1P53783 Gm4607-201ENSMUST00000206649 577 ntBASIC13.96□□□□□ -0.17
Sox1P53783 Gm13097-201ENSMUST00000210722 397 ntBASIC13.96□□□□□ -0.17
Sox1P53783 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.96□□□□□ -0.17
Sox1P53783 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sox1P53783 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Sox1P53783 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.96□□□□□ -0.17
Sox1P53783 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sox1P53783 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox1P53783 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox1P53783 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.96□□□□□ -0.18
Sox1P53783 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.96□□□□□ -0.18
Sox1P53783 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox1P53783 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sox1P53783 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Sox1P53783 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox1P53783 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox1P53783 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox1P53783 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox1P53783 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms