Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.39□□□□□ -0.59
Nkx2-1P50220 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.39□□□□□ -0.59
Nkx2-1P50220 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.38□□□□□ -0.59
Nkx2-1P50220 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.38□□□□□ -0.59
Nkx2-1P50220 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Nkx2-1P50220 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.38□□□□□ -0.59
Nkx2-1P50220 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-1P50220 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.37□□□□□ -0.59
Nkx2-1P50220 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Gm1401-201ENSMUST00000122048 772 ntBASIC11.37□□□□□ -0.59
Nkx2-1P50220 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms