Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Ercc3P49135 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc3P49135 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ercc3P49135 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc3P49135 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc3P49135 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc3P49135 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc3P49135 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.33■□□□□ 0.2
Ercc3P49135 Gm15240-201ENSMUST00000118156 720 ntBASIC16.33■□□□□ 0.2
Ercc3P49135 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Ercc3P49135 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.33■□□□□ 0.2
Ercc3P49135 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.33■□□□□ 0.2
Ercc3P49135 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ercc3P49135 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.33■□□□□ 0.2
Ercc3P49135 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ercc3P49135 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.33■□□□□ 0.2
Ercc3P49135 Matn2-206ENSMUST00000228570 2798 ntBASIC16.33■□□□□ 0.2
Ercc3P49135 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.33■□□□□ 0.2
Ercc3P49135 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc3P49135 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.33■□□□□ 0.2
Ercc3P49135 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.32■□□□□ 0.2
Ercc3P49135 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.32■□□□□ 0.2
Ercc3P49135 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.32■□□□□ 0.2
Ercc3P49135 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ercc3P49135 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.32■□□□□ 0.2
Ercc3P49135 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Ercc3P49135 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc3P49135 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.31■□□□□ 0.2
Ercc3P49135 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ercc3P49135 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ercc3P49135 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ercc3P49135 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.31■□□□□ 0.2
Ercc3P49135 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ercc3P49135 Gm4804-201ENSMUST00000182234 999 ntBASIC16.31■□□□□ 0.2
Ercc3P49135 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Ercc3P49135 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.31■□□□□ 0.2
Ercc3P49135 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.31■□□□□ 0.2
Ercc3P49135 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc3P49135 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.3■□□□□ 0.2
Ercc3P49135 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Ercc3P49135 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc3P49135 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.3■□□□□ 0.2
Ercc3P49135 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.3■□□□□ 0.2
Ercc3P49135 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.3■□□□□ 0.2
Ercc3P49135 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms