Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.45■□□□□ 0.22
Nedd4P46935 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.45■□□□□ 0.22
Nedd4P46935 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.45■□□□□ 0.22
Nedd4P46935 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.45■□□□□ 0.22
Nedd4P46935 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.45■□□□□ 0.22
Nedd4P46935 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.45■□□□□ 0.22
Nedd4P46935 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd4P46935 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd4P46935 Gm22042-201ENSMUST00000082989 165 ntBASIC16.45■□□□□ 0.22
Nedd4P46935 Gm26232-201ENSMUST00000083360 166 ntBASIC16.45■□□□□ 0.22
Nedd4P46935 Gm24136-201ENSMUST00000083374 165 ntBASIC16.45■□□□□ 0.22
Nedd4P46935 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.45■□□□□ 0.22
Nedd4P46935 Gm26110-201ENSMUST00000083971 165 ntBASIC16.45■□□□□ 0.22
Nedd4P46935 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd4P46935 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.45■□□□□ 0.22
Nedd4P46935 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
Nedd4P46935 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd4P46935 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd4P46935 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd4P46935 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd4P46935 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd4P46935 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd4P46935 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.45■□□□□ 0.22
Nedd4P46935 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.44■□□□□ 0.22
Nedd4P46935 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.44■□□□□ 0.22
Nedd4P46935 Gm12566-201ENSMUST00000121479 359 ntBASIC16.44■□□□□ 0.22
Nedd4P46935 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.44■□□□□ 0.22
Nedd4P46935 AU022133-201ENSMUST00000200601 873 ntBASIC16.44■□□□□ 0.22
Nedd4P46935 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Gm16372-201ENSMUST00000073088 450 ntBASIC16.44■□□□□ 0.22
Nedd4P46935 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nedd4P46935 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.44■□□□□ 0.22
Nedd4P46935 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
Nedd4P46935 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Nedd4P46935 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Nedd4P46935 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd4P46935 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nedd4P46935 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
Nedd4P46935 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.43■□□□□ 0.22
Nedd4P46935 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.43■□□□□ 0.22
Nedd4P46935 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Nedd4P46935 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.43■□□□□ 0.22
Nedd4P46935 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.43■□□□□ 0.22
Nedd4P46935 Gm3890-201ENSMUST00000182416 207 ntBASIC16.43■□□□□ 0.22
Nedd4P46935 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.43■□□□□ 0.22
Nedd4P46935 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.43■□□□□ 0.22
Nedd4P46935 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nedd4P46935 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nedd4P46935 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd4P46935 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.42■□□□□ 0.22
Nedd4P46935 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Nedd4P46935 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
Nedd4P46935 Gm11439-201ENSMUST00000118598 409 ntBASIC16.42■□□□□ 0.22
Nedd4P46935 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.42■□□□□ 0.22
Nedd4P46935 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Nedd4P46935 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.42■□□□□ 0.22
Nedd4P46935 Mir7032-201ENSMUST00000185154 79 ntBASIC16.42■□□□□ 0.22
Nedd4P46935 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Nedd4P46935 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.42■□□□□ 0.22
Nedd4P46935 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Nedd4P46935 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.42■□□□□ 0.22
Nedd4P46935 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.42■□□□□ 0.22
Nedd4P46935 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.42■□□□□ 0.22
Nedd4P46935 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nedd4P46935 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nedd4P46935 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd4P46935 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms