Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox18P43680 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox18P43680 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox18P43680 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.21□□□□□ -0.29
Sox18P43680 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.21□□□□□ -0.29
Sox18P43680 Gm27331-201ENSMUST00000183705 60 ntBASIC13.21□□□□□ -0.29
Sox18P43680 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.21□□□□□ -0.29
Sox18P43680 Gm18377-201ENSMUST00000215141 607 ntBASIC13.21□□□□□ -0.29
Sox18P43680 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Sox18P43680 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.21□□□□□ -0.29
Sox18P43680 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox18P43680 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.21□□□□□ -0.3
Sox18P43680 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox18P43680 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.21□□□□□ -0.3
Sox18P43680 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.21□□□□□ -0.3
Sox18P43680 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.2□□□□□ -0.3
Sox18P43680 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Gm14776-201ENSMUST00000121029 887 ntBASIC13.2□□□□□ -0.3
Sox18P43680 Gm12176-201ENSMUST00000121420 875 ntBASIC13.2□□□□□ -0.3
Sox18P43680 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.2□□□□□ -0.3
Sox18P43680 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.2□□□□□ -0.3
Sox18P43680 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.2□□□□□ -0.3
Sox18P43680 Gm37293-201ENSMUST00000191658 295 ntBASIC13.2□□□□□ -0.3
Sox18P43680 Gm42919-201ENSMUST00000197753 1284 ntBASIC13.2□□□□□ -0.3
Sox18P43680 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Gm18473-201ENSMUST00000220543 868 ntBASIC13.2□□□□□ -0.3
Sox18P43680 AC125539.1-202ENSMUST00000226449 670 ntBASIC13.2□□□□□ -0.3
Sox18P43680 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Sox18P43680 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox18P43680 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Gm15074-201ENSMUST00000117603 936 ntBASIC13.19□□□□□ -0.3
Sox18P43680 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Sox18P43680 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sox18P43680 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.19□□□□□ -0.3
Sox18P43680 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox18P43680 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox18P43680 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.19□□□□□ -0.3
Sox18P43680 Gm29705-201ENSMUST00000212598 474 ntBASIC13.19□□□□□ -0.3
Sox18P43680 Gm18935-201ENSMUST00000212692 664 ntBASIC13.19□□□□□ -0.3
Sox18P43680 Gm9368-201ENSMUST00000219348 831 ntBASIC13.19□□□□□ -0.3
Sox18P43680 Gm8598-201ENSMUST00000221184 836 ntBASIC13.19□□□□□ -0.3
Sox18P43680 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms