Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd9P40240 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cd9P40240 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd9P40240 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd9P40240 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd9P40240 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.55□□□□□ -0.24
Cd9P40240 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd9P40240 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cd9P40240 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.54□□□□□ -0.24
Cd9P40240 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cd9P40240 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Cd9P40240 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.54□□□□□ -0.24
Cd9P40240 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Cd9P40240 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.54□□□□□ -0.24
Cd9P40240 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.54□□□□□ -0.24
Cd9P40240 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.54□□□□□ -0.24
Cd9P40240 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.54□□□□□ -0.24
Cd9P40240 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.54□□□□□ -0.24
Cd9P40240 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.54□□□□□ -0.24
Cd9P40240 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.54□□□□□ -0.24
Cd9P40240 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cd9P40240 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 Matn2-206ENSMUST00000228570 2798 ntBASIC13.54□□□□□ -0.24
Cd9P40240 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd9P40240 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd9P40240 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cd9P40240 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cd9P40240 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cd9P40240 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cd9P40240 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.53□□□□□ -0.24
Cd9P40240 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.53□□□□□ -0.24
Cd9P40240 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.53□□□□□ -0.24
Cd9P40240 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd9P40240 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.53□□□□□ -0.24
Cd9P40240 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.53□□□□□ -0.24
Cd9P40240 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd9P40240 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.53□□□□□ -0.24
Cd9P40240 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cd9P40240 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cd9P40240 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd9P40240 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Cd9P40240 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cd9P40240 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd9P40240 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd9P40240 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd9P40240 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd9P40240 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd9P40240 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cd9P40240 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd9P40240 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cd9P40240 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cd9P40240 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd9P40240 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd9P40240 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd9P40240 Gm12151-201ENSMUST00000121374 290 ntBASIC13.52□□□□□ -0.25
Cd9P40240 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.52□□□□□ -0.25
Cd9P40240 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms