Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm19208-201ENSMUST00000213861 912 ntBASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.07□□□□□ -0.16
Cxcl12P40224 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.07□□□□□ -0.16
Cxcl12P40224 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.07□□□□□ -0.16
Cxcl12P40224 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.07□□□□□ -0.16
Cxcl12P40224 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Cxcl12P40224 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.06□□□□□ -0.16
Cxcl12P40224 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.06□□□□□ -0.16
Cxcl12P40224 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Gm14350-201ENSMUST00000116642 640 ntBASIC14.06□□□□□ -0.16
Cxcl12P40224 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Gm18212-201ENSMUST00000211678 889 ntBASIC14.06□□□□□ -0.16
Cxcl12P40224 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.06□□□□□ -0.16
Cxcl12P40224 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.06□□□□□ -0.16
Cxcl12P40224 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.06□□□□□ -0.16
Cxcl12P40224 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl12P40224 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Cxcl12P40224 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm24830-201ENSMUST00000102024 166 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Cxcl12P40224 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cxcl12P40224 Mir5120-201ENSMUST00000175020 78 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm25890-201ENSMUST00000177643 165 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm22614-201ENSMUST00000178300 165 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm3890-201ENSMUST00000182416 207 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.05□□□□□ -0.16
Cxcl12P40224 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm22042-201ENSMUST00000082989 165 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm26232-201ENSMUST00000083360 166 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm24136-201ENSMUST00000083374 165 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm26110-201ENSMUST00000083971 165 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cxcl12P40224 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.05□□□□□ -0.16
Cxcl12P40224 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms