Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.3□□□□□ -0.6
Timp3P39876 Gm4804-201ENSMUST00000182234 999 ntBASIC11.3□□□□□ -0.6
Timp3P39876 Gm28760-201ENSMUST00000185995 736 ntBASIC11.3□□□□□ -0.6
Timp3P39876 Gm42612-201ENSMUST00000197986 623 ntBASIC11.3□□□□□ -0.6
Timp3P39876 Gm18018-201ENSMUST00000198273 408 ntBASIC11.3□□□□□ -0.6
Timp3P39876 Gm43170-201ENSMUST00000199827 612 ntBASIC11.3□□□□□ -0.6
Timp3P39876 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.3□□□□□ -0.6
Timp3P39876 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.3□□□□□ -0.6
Timp3P39876 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.3□□□□□ -0.6
Timp3P39876 Gm19220-201ENSMUST00000222682 803 ntBASIC11.3□□□□□ -0.6
Timp3P39876 Gm15823-201ENSMUST00000064305 670 ntBASIC11.3□□□□□ -0.6
Timp3P39876 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Timp3P39876 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Timp3P39876 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Timp3P39876 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Timp3P39876 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Timp3P39876 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Timp3P39876 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Timp3P39876 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Timp3P39876 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.29□□□□□ -0.6
Timp3P39876 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.29□□□□□ -0.6
Timp3P39876 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.29□□□□□ -0.6
Timp3P39876 Gm44608-201ENSMUST00000206827 855 ntBASIC11.29□□□□□ -0.6
Timp3P39876 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Timp3P39876 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.29□□□□□ -0.6
Timp3P39876 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Timp3P39876 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.29□□□□□ -0.6
Timp3P39876 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.29□□□□□ -0.6
Timp3P39876 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Timp3P39876 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.29□□□□□ -0.6
Timp3P39876 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Timp3P39876 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Timp3P39876 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Timp3P39876 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.28□□□□□ -0.6
Timp3P39876 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.28□□□□□ -0.6
Timp3P39876 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.28□□□□□ -0.6
Timp3P39876 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.28□□□□□ -0.6
Timp3P39876 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms