Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rom1P32958 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rom1P32958 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rom1P32958 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rom1P32958 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.87□□□□□ -0.67
Rom1P32958 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rom1P32958 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rom1P32958 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rom1P32958 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rom1P32958 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.87□□□□□ -0.67
Rom1P32958 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Rom1P32958 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.87□□□□□ -0.67
Rom1P32958 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 AA543401-201ENSMUST00000164248 1269 ntBASIC10.87□□□□□ -0.67
Rom1P32958 Gm27920-201ENSMUST00000183953 96 ntBASIC10.87□□□□□ -0.67
Rom1P32958 Gm27301-201ENSMUST00000184012 127 ntBASIC10.87□□□□□ -0.67
Rom1P32958 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rom1P32958 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rom1P32958 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.87□□□□□ -0.67
Rom1P32958 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.87□□□□□ -0.67
Rom1P32958 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rom1P32958 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.87□□□□□ -0.67
Rom1P32958 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rom1P32958 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rom1P32958 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.86□□□□□ -0.67
Rom1P32958 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.86□□□□□ -0.67
Rom1P32958 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rom1P32958 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rom1P32958 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Rom1P32958 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Gm7153-201ENSMUST00000117092 455 ntBASIC10.86□□□□□ -0.67
Rom1P32958 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Gm13036-201ENSMUST00000117799 748 ntBASIC10.86□□□□□ -0.67
Rom1P32958 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.86□□□□□ -0.67
Rom1P32958 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.86□□□□□ -0.67
Rom1P32958 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rom1P32958 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.86□□□□□ -0.67
Rom1P32958 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Rom1P32958 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rom1P32958 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rom1P32958 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms