Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nfkb1P25799 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nfkb1P25799 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nfkb1P25799 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nfkb1P25799 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.13□□□□□ -0.15
Nfkb1P25799 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.13□□□□□ -0.15
Nfkb1P25799 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.12□□□□□ -0.15
Nfkb1P25799 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nfkb1P25799 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Gm13689-201ENSMUST00000119360 685 ntBASIC14.12□□□□□ -0.15
Nfkb1P25799 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.12□□□□□ -0.15
Nfkb1P25799 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nfkb1P25799 Gm6244-201ENSMUST00000178732 841 ntBASIC14.12□□□□□ -0.15
Nfkb1P25799 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nfkb1P25799 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.12□□□□□ -0.15
Nfkb1P25799 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.12□□□□□ -0.15
Nfkb1P25799 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.12□□□□□ -0.15
Nfkb1P25799 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.12□□□□□ -0.15
Nfkb1P25799 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nfkb1P25799 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.12□□□□□ -0.15
Nfkb1P25799 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nfkb1P25799 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nfkb1P25799 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nfkb1P25799 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nfkb1P25799 Gm15824-201ENSMUST00000119516 955 ntBASIC14.11□□□□□ -0.15
Nfkb1P25799 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.11□□□□□ -0.15
Nfkb1P25799 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.11□□□□□ -0.15
Nfkb1P25799 Gm8463-201ENSMUST00000208573 613 ntBASIC14.11□□□□□ -0.15
Nfkb1P25799 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.11□□□□□ -0.15
Nfkb1P25799 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.11□□□□□ -0.15
Nfkb1P25799 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nfkb1P25799 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Nfkb1P25799 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nfkb1P25799 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.1□□□□□ -0.15
Nfkb1P25799 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms