Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NdnP25233 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.03□□□□□ -0.64
NdnP25233 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.03□□□□□ -0.64
NdnP25233 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NdnP25233 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NdnP25233 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NdnP25233 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
NdnP25233 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
NdnP25233 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NdnP25233 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NdnP25233 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NdnP25233 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NdnP25233 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NdnP25233 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NdnP25233 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NdnP25233 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
NdnP25233 Olfr129-201ENSMUST00000122318 993 ntBASIC11.02□□□□□ -0.65
NdnP25233 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.02□□□□□ -0.65
NdnP25233 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.02□□□□□ -0.65
NdnP25233 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
NdnP25233 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NdnP25233 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.02□□□□□ -0.65
NdnP25233 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.02□□□□□ -0.65
NdnP25233 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
NdnP25233 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
NdnP25233 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.02□□□□□ -0.65
NdnP25233 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NdnP25233 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
NdnP25233 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.01□□□□□ -0.65
NdnP25233 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.01□□□□□ -0.65
NdnP25233 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
NdnP25233 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.01□□□□□ -0.65
NdnP25233 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.01□□□□□ -0.65
NdnP25233 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.01□□□□□ -0.65
NdnP25233 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
NdnP25233 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
NdnP25233 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NdnP25233 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
NdnP25233 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms