Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxd8P23463 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.11□□□□□ -0.15
Hoxd8P23463 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Hoxd8P23463 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Hoxd8P23463 Gm13123-201ENSMUST00000122173 492 ntBASIC14.11□□□□□ -0.15
Hoxd8P23463 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxd8P23463 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxd8P23463 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxd8P23463 Gm38002-201ENSMUST00000193255 180 ntBASIC14.11□□□□□ -0.15
Hoxd8P23463 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.11□□□□□ -0.15
Hoxd8P23463 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.11□□□□□ -0.15
Hoxd8P23463 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.11□□□□□ -0.15
Hoxd8P23463 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxd8P23463 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxd8P23463 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxd8P23463 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Gm6447-201ENSMUST00000118905 835 ntBASIC14.1□□□□□ -0.15
Hoxd8P23463 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Gm7593-201ENSMUST00000187246 644 ntBASIC14.1□□□□□ -0.15
Hoxd8P23463 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.1□□□□□ -0.15
Hoxd8P23463 Gm37319-201ENSMUST00000193500 636 ntBASIC14.1□□□□□ -0.15
Hoxd8P23463 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.1□□□□□ -0.15
Hoxd8P23463 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hoxd8P23463 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.1□□□□□ -0.15
Hoxd8P23463 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxd8P23463 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxd8P23463 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.09□□□□□ -0.15
Hoxd8P23463 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.09□□□□□ -0.15
Hoxd8P23463 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxd8P23463 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxd8P23463 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxd8P23463 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxd8P23463 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms