Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Clk1P22518 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.87□□□□□ -0.35
Clk1P22518 Gm24543-201ENSMUST00000103867 82 ntBASIC12.87□□□□□ -0.35
Clk1P22518 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Clk1P22518 AA543401-201ENSMUST00000164248 1269 ntBASIC12.87□□□□□ -0.35
Clk1P22518 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Gm27622-201ENSMUST00000183779 60 ntBASIC12.87□□□□□ -0.35
Clk1P22518 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.87□□□□□ -0.35
Clk1P22518 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Gm5779-201ENSMUST00000218467 910 ntBASIC12.87□□□□□ -0.35
Clk1P22518 Gm16476-201ENSMUST00000221544 139 ntBASIC12.87□□□□□ -0.35
Clk1P22518 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Clk1P22518 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Clk1P22518 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.87□□□□□ -0.35
Clk1P22518 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clk1P22518 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.86□□□□□ -0.35
Clk1P22518 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Clk1P22518 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Clk1P22518 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Clk1P22518 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.86□□□□□ -0.35
Clk1P22518 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.86□□□□□ -0.35
Clk1P22518 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.86□□□□□ -0.35
Clk1P22518 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Clk1P22518 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Clk1P22518 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clk1P22518 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Clk1P22518 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.85□□□□□ -0.35
Clk1P22518 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Clk1P22518 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.85□□□□□ -0.35
Clk1P22518 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.85□□□□□ -0.35
Clk1P22518 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.85□□□□□ -0.35
Clk1P22518 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.85□□□□□ -0.35
Clk1P22518 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clk1P22518 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clk1P22518 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.85□□□□□ -0.35
Clk1P22518 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms