Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rb1P13405 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.13□□□□□ -0.15
Rb1P13405 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rb1P13405 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Gm12585-201ENSMUST00000117307 290 ntBASIC14.13□□□□□ -0.15
Rb1P13405 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.13□□□□□ -0.15
Rb1P13405 Gm12138-201ENSMUST00000122180 951 ntBASIC14.13□□□□□ -0.15
Rb1P13405 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rb1P13405 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.13□□□□□ -0.15
Rb1P13405 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rb1P13405 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rb1P13405 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rb1P13405 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.12□□□□□ -0.15
Rb1P13405 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rb1P13405 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Rb1P13405 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rb1P13405 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.12□□□□□ -0.15
Rb1P13405 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Gm15824-201ENSMUST00000119516 955 ntBASIC14.12□□□□□ -0.15
Rb1P13405 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Gm11918-201ENSMUST00000121660 179 ntBASIC14.12□□□□□ -0.15
Rb1P13405 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.12□□□□□ -0.15
Rb1P13405 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rb1P13405 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rb1P13405 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.12□□□□□ -0.15
Rb1P13405 Gm18624-201ENSMUST00000220966 658 ntBASIC14.12□□□□□ -0.15
Rb1P13405 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rb1P13405 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rb1P13405 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.12□□□□□ -0.15
Rb1P13405 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rb1P13405 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rb1P13405 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Rb1P13405 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rb1P13405 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.11□□□□□ -0.15
Rb1P13405 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Gm13829-201ENSMUST00000119600 138 ntBASIC14.11□□□□□ -0.15
Rb1P13405 Gm15806-201ENSMUST00000120696 955 ntBASIC14.11□□□□□ -0.15
Rb1P13405 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.11□□□□□ -0.15
Rb1P13405 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Gm8602-201ENSMUST00000184045 607 ntBASIC14.11□□□□□ -0.15
Rb1P13405 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 Gm10766-202ENSMUST00000194123 606 ntBASIC14.11□□□□□ -0.15
Rb1P13405 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rb1P13405 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms